compute_for_mcview() computes gene-gene similarity without normalization

tanaylab / metacells

Metacells - Single-cell RNA Sequencing Analysis

MIT License

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compute_for_mcview() computes gene-gene similarity without normalization #34

Closed orenmn closed 1 year ago

orenmn commented 1 year ago

Currently (if I understand correctly) pipeline.compute_for_mcview() computes gene-gene similarity without first normalizing to the total number of UMIs per metacell.

orenbenkiki commented 1 year ago

In the-about-to-be-released version 0.9 compute_for_mcview works on fractions so there's no issue there.

orenbenkiki commented 1 year ago

Version 0.9 is now published so closing this as done.