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tand826
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wsiprocess
Whole Slide Image (WSI) Processing Library for Histopathological / Cytopathological Machine Learning Tasks
Apache License 2.0
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Ndp view annotation
#52
tand826
closed
1 year ago
0
removed as_completed to fix the way the progress bar counts up the pr…
#51
tand826
closed
1 year ago
0
default extension from cli changed to jpg
#50
tand826
closed
1 year ago
0
python bioformats is fast enough?
#49
tand826
opened
1 year ago
8
on_annotation parameter can be float or int
#48
tand826
closed
1 year ago
0
list of annotation tools
#47
tand826
opened
1 year ago
4
pytorch dataloader for wsi(s)
#46
tand826
closed
1 year ago
1
basic_usage.py No any result
#45
Gaodelike
closed
1 year ago
6
geojson
#44
tand826
closed
1 year ago
1
on_annotation per class
#43
tand826
closed
1 year ago
1
limit cores used in parallel patching
#42
tand826
closed
2 years ago
1
save results as csv
#41
tand826
closed
1 year ago
1
load rule from dict
#40
tand826
closed
2 years ago
1
reduce memory consumption
#39
tand826
closed
2 years ago
3
fix requirements versions
#38
tand826
closed
2 years ago
1
warn if already patched
#37
tand826
closed
2 years ago
1
extension of extracted patch
#36
tand826
closed
2 years ago
0
OOM error when creating masks
#35
tand826
closed
2 years ago
2
extend rules
#34
tand826
closed
2 years ago
0
better thresholding methods
#33
tand826
opened
2 years ago
0
annotation parser tutorial
#32
tand826
closed
2 years ago
1
30 usage to examples
#31
tand826
closed
3 years ago
0
usages to example/usage1.py
#30
tand826
closed
3 years ago
1
refactored parsers
#29
tand826
closed
3 years ago
0
refactor parsers
#28
tand826
closed
3 years ago
0
22 backend change
#27
tand826
closed
3 years ago
0
progress bar enabled with verbose option
#26
tand826
closed
3 years ago
0
progress bar to show the patching status
#25
tand826
closed
3 years ago
0
method name none is switched to evaluation
#24
tand826
closed
3 years ago
0
method "None" to "evaluation"
#23
tand826
closed
3 years ago
1
add openslide backend
#22
tand826
closed
3 years ago
0
Crop Bounding Boxes after detection method extraction
#21
tand826
closed
3 years ago
3
Parser for SlideRunner annotations
#20
tand826
closed
3 years ago
19
Dot annotation to segmentation mask
#19
tand826
opened
3 years ago
1
WSI Process CLI Not Working
#18
bnapora
closed
3 years ago
10
Jupyter Notebook Examples
#17
bnapora
closed
3 years ago
0
update installation
#16
tand826
closed
4 years ago
1
rst for readthedocs
#15
tand826
closed
2 years ago
2
Patcher.find_bbs does not cover all the cases
#14
tand826
closed
4 years ago
1
Add user specified function to patching
#13
tand826
closed
1 year ago
2
progress of the patching
#12
tand826
closed
3 years ago
1
better binary masks
#11
tand826
closed
4 years ago
1
set extract_patches True as default from command line
#10
tand826
closed
4 years ago
1
optimize args of cli.py
#9
tand826
closed
4 years ago
1
ModuleNotFoundError: No module named 'wsiprocess.converters'
#8
Arghya999
closed
4 years ago
1
Any guide to generate patches of images given a mask
#7
bharaniabhishek123
closed
4 years ago
1
add meta functions
#6
tand826
closed
4 years ago
0
enable magnification settings
#5
tand826
closed
2 years ago
1
output as voc or coco style
#4
tand826
closed
4 years ago
1
add documentation
#3
tand826
closed
4 years ago
3
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