tanghaibao / goatools

Python library to handle Gene Ontology (GO) terms
BSD 2-Clause "Simplified" License
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Question about map_to_slim #290

Closed juanjo255 closed 4 months ago

juanjo255 commented 7 months ago

Hi developers,

Thanks for this useful tool.

Please, I ask your help to understand a concept. I have some GO terms retrieved from InterProScan functional annotation and I want to make some plots with number of genes in higher depths. However when I map the genes using map_to_slim from 10.000 genes having a GO term, map_to_slim return only 1600 genes. What could be the reason for this behavior?

Thank you very much.