install error of jcvi

[ma2o-3]

Hi, I had an error to install the jcvi.

pip install -U jcvi

Collecting norns>=0.1.6 (from genomepy->jcvi) Using cached norns-0.1.6.tar.gz (3.6 kB) Preparing metadata (setup.py) ... error error: subprocess-exited-with-error

× python setup.py egg_info did not run successfully. │ exit code: 1 ╰─> [7 lines of output] Traceback (most recent call last): File "", line 2, in File "", line 34, in File "/private/var/folders/gw/kty3kfl903g8cnyzrj_k50hw0000gn/T/pip-install-8gypfgsf/norns_b4197d869aac486581dacba5ae716ccf/setup.py", line 19, in long_description = pypandoc.convert('README.md', 'rst') ^^^^^^^^^^^^^^^^ AttributeError: module 'pypandoc' has no attribute 'convert' [end of output]

note: This error originates from a subprocess, and is likely not a problem with pip. error: metadata-generation-failed

× Encountered error while generating package metadata. ╰─> See above for output.

note: This is an issue with the package mentioned above, not pip. hint: See above for details.

how can i solve this error? i am very happy if you give me the suggestion.

best Hiroki

[tanghaibao]

This is a problem with dependency genomepy => norns, and a known issue. https://stackoverflow.com/questions/74745548/attributeerror-module-pypandoc-has-no-attribute-convert

The link given requires downgrading pypandoc. I'm not sure of other alternative.

A clean install of jcvi with no existing pypandoc also works. Bottom line, existing version of pypandoc on your computer and norns don't like each other.

python -m venv .venv
.venv/bin/pip install jcvi

[ma2o-3]

thank you! its getting running!