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taowenmicro / ggClusterNet

Microbial ecological network visualization clustering
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install failed #23

Open wenyuhaokikika opened 5 months ago

wenyuhaokikika commented 5 months ago

安装过程中问题有很多，可能是配置不够详细，能否打印一下Rdata，包括R语言的版本等，我想我按照这个配置安装应该可以成功安装。

我遇到的问题如下：

Error in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) : 
  namespace ‘Matrix’ 1.3-4 is being loaded, but >= 1.6.0 is required
Calls: <Anonymous> ... namespaceImportFrom -> asNamespace -> loadNamespace
Execution halted
ERROR: lazy loading failed for package ‘MatrixModels’
* removing ‘/home/wyh/anaconda3/envs/dxpipe/lib/R/library/MatrixModels’
ERROR: dependency ‘MatrixModels’ is not available for package ‘quantreg’
* removing ‘/home/wyh/anaconda3/envs/dxpipe/lib/R/library/quantreg’
ERROR: dependency ‘quantreg’ is not available for package ‘car’
* removing ‘/home/wyh/anaconda3/envs/dxpipe/lib/R/library/car’
ERROR: dependency ‘car’ is not available for package ‘rstatix’
* removing ‘/home/wyh/anaconda3/envs/dxpipe/lib/R/library/rstatix’
ERROR: dependency ‘rstatix’ is not available for package ‘ggpubr’
* removing ‘/home/wyh/anaconda3/envs/dxpipe/lib/R/library/ggpubr’

The downloaded source packages are in
        ‘/tmp/RtmpEbViY1/downloaded_packages’
Updating HTML index of packages in '.Library'
Making 'packages.html' ... done
── R CMD build ───────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
✔  checking for file ‘/tmp/RtmpEbViY1/remotes20c095933a282/taowenmicro-ggClusterNet-747b521/DESCRIPTION’ (360ms)
─  preparing ‘ggClusterNet’:
✔  checking DESCRIPTION meta-information ...
─  excluding invalid files
   Subdirectory 'man' contains invalid file names:
     ‘plot_zoom_png.png’
─  checking for LF line-endings in source and make files and shell scripts
─  checking for empty or unneeded directories
     NB: this package now depends on R (>= 3.5.0)
     WARNING: Added dependency on R >= 3.5.0 because serialized objects in
     serialize/load version 3 cannot be read in older versions of R.
     File(s) containing such objects:
       ‘ggClusterNet/data/env.rda’ ‘ggClusterNet/data/ps16s.rda’
       ‘ggClusterNet/data/psITS.rda’
─  building ‘ggClusterNet_0.1.0.tar.gz’

ERROR: dependency ‘ggpubr’ is not available for package ‘ggClusterNet’

R version，4.1.1

thank you~~~