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tapios / risk-networks

Code for risk networks: a blend of compartmental models, graphs, data assimilation and semi-supervised learning
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Delete fast_contact_simulator.py #78

Closed glwagner closed 4 years ago

glwagner commented 4 years ago

the fast contact simulator is redundant with the contact simulator.

lubo93 commented 4 years ago

Is the other "temporal Gillespie" sampler ready to be merged? I believe that I am still using "fast contact simulator" in my current branch.

odunbar commented 4 years ago

I have now switched to using the ContactSimulator from master. @lubo93 all you need to do is also change the FastContactSimulator into ContactSimulator DiurnalMeanContactRate function into the DiurnalContactInceptionRate

The init functions have the same arguments (just with variations of the keywords) but otherwise the same. so it should be a clean switch

lubo93 commented 4 years ago

Ok, thanks for clarifying.