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taxprofiler / taxpasta

TAXnomic Profile Aggregation and STAndardisation
https://taxpasta.readthedocs.io/
Apache License 2.0
34 stars 7 forks source link

Insert taxonomic information in a more suitable column order #86

Closed Midnighter closed 1 year ago

Midnighter commented 1 year ago
codecov-commenter commented 1 year ago

Codecov Report

Patch coverage has no change and project coverage change: -0.42 :warning:

Comparison is base (0606f04) 82.05% compared to head (4249e10) 81.64%.

:exclamation: Current head 4249e10 differs from pull request most recent head b261af5. Consider uploading reports for the commit b261af5 to get more accurate results

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Additional details and impacted files ```diff @@ Coverage Diff @@ ## dev #86 +/- ## ========================================== - Coverage 82.05% 81.64% -0.42% ========================================== Files 103 103 Lines 1577 1585 +8 Branches 278 274 -4 ========================================== Hits 1294 1294 - Misses 242 250 +8 Partials 41 41 ``` | [Impacted Files](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None) | Coverage Δ | | |---|---|---| | [...rd\_profile\_writer/arrow\_standard\_profile\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3N0YW5kYXJkX3Byb2ZpbGVfd3JpdGVyL2Fycm93X3N0YW5kYXJkX3Byb2ZpbGVfd3JpdGVyLnB5) | `100.00% <ø> (ø)` | | | [...dard\_profile\_writer/ods\_standard\_profile\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3N0YW5kYXJkX3Byb2ZpbGVfd3JpdGVyL29kc19zdGFuZGFyZF9wcm9maWxlX3dyaXRlci5weQ==) | `100.00% <ø> (ø)` | | | [...\_profile\_writer/parquet\_standard\_profile\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3N0YW5kYXJkX3Byb2ZpbGVfd3JpdGVyL3BhcnF1ZXRfc3RhbmRhcmRfcHJvZmlsZV93cml0ZXIucHk=) | `100.00% <ø> (ø)` | | | [...ard\_profile\_writer/xlsx\_standard\_profile\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3N0YW5kYXJkX3Byb2ZpbGVfd3JpdGVyL3hsc3hfc3RhbmRhcmRfcHJvZmlsZV93cml0ZXIucHk=) | `100.00% <ø> (ø)` | | | [...idy\_observation\_table\_writer/arrow\_table\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3RpZHlfb2JzZXJ2YXRpb25fdGFibGVfd3JpdGVyL2Fycm93X3RhYmxlX3dyaXRlci5weQ==) | `100.00% <ø> (ø)` | | | [.../tidy\_observation\_table\_writer/ods\_table\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3RpZHlfb2JzZXJ2YXRpb25fdGFibGVfd3JpdGVyL29kc190YWJsZV93cml0ZXIucHk=) | `100.00% <ø> (ø)` | | | [...y\_observation\_table\_writer/parquet\_table\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3RpZHlfb2JzZXJ2YXRpb25fdGFibGVfd3JpdGVyL3BhcnF1ZXRfdGFibGVfd3JpdGVyLnB5) | `100.00% <ø> (ø)` | | | [...tidy\_observation\_table\_writer/xlsx\_table\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3RpZHlfb2JzZXJ2YXRpb25fdGFibGVfd3JpdGVyL3hsc3hfdGFibGVfd3JpdGVyLnB5) | `100.00% <ø> (ø)` | | | [...able\_writer/arrow\_wide\_observation\_table\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3dpZGVfb2JzZXJ2YXRpb25fdGFibGVfd3JpdGVyL2Fycm93X3dpZGVfb2JzZXJ2YXRpb25fdGFibGVfd3JpdGVyLnB5) | `100.00% <ø> (ø)` | | | [...table\_writer/biom\_wide\_observation\_table\_writer.py](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None#diff-c3JjL3RheHBhc3RhL2luZnJhc3RydWN0dXJlL2FwcGxpY2F0aW9uL3dpZGVfb2JzZXJ2YXRpb25fdGFibGVfd3JpdGVyL2Jpb21fd2lkZV9vYnNlcnZhdGlvbl90YWJsZV93cml0ZXIucHk=) | `89.47% <ø> (ø)` | | | ... and [6 more](https://codecov.io/gh/taxprofiler/taxpasta/pull/86?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None) | | Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=None)

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