tbepler / topaz

Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.
GNU General Public License v3.0
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A problem with denoising. #88

Closed yushuv closed 3 years ago

yushuv commented 3 years ago

Hi all, I have an odd problem with denosing. Not all the time I get the pictures of the denoised micrograph. It says it's done but I can't see anything even when I try to look at all of them and not just the ones in the cryosparc gui.

In the picture I added here I can see the that in the big dataset (J10) I can see them and in the small one (J14 and J16) I can't see any of them. I want to use these to see if the picking is right and since I can't see the denoise ones I can't see much if the picking is well enough for me.

I run them the same.

Screenshot 2021-03-18 at 14 04 23

Thanks, Yehuda