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tbepler / topaz

Pipeline for particle picking in cryo-electron microscopy images using convolutional neural networks trained from positive and unlabeled examples. Also featuring micrograph and tomogram denoising with DNNs.
GNU General Public License v3.0
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Support for Cuda 11 #98

Closed alexjnoble closed 3 years ago

alexjnoble commented 3 years ago

Oli reports here that Cuda 11.2 seems to not be compatible with Topaz:

https://discuss.cryosparc.com/t/topaz-train-error-in-csparc-3-2/6500

Can support be added?

Thanks, -Alex

tbepler commented 3 years ago

Looks like the cryoSPARC team got topaz to run with CUDA 11.1, so I don't think this is a topaz issue. Looks like it was just an installation problem with pytorch.