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tdhock / data.table-revdeps

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R-devel is not checking in the last few days #27

Closed tdhock closed 6 months ago

tdhock commented 7 months ago

I ran code in analyze.Rmd I see that glob for diff files does not obtain any files under R-devel folders

diff.file.vec <- Sys.glob(file.path(
  job.dir, "packages", "*", "*", "significant_differences.csv"))

> diff.file.vec
 [1] "/scratch/th798/data.table-revdeps/2024-04-30/packages/BTYDplus/R_version_4.4.0_2024-04-24/significant_differences.csv"      
 [2] "/scratch/th798/data.table-revdeps/2024-04-30/packages/calmr/R_version_4.4.0_2024-04-24/significant_differences.csv"         
 [3] "/scratch/th798/data.table-revdeps/2024-04-30/packages/damr/R_version_4.4.0_2024-04-24/significant_differences.csv"          
 [4] "/scratch/th798/data.table-revdeps/2024-04-30/packages/do/R_version_4.4.0_2024-04-24/significant_differences.csv"            
 [5] "/scratch/th798/data.table-revdeps/2024-04-30/packages/DramaAnalysis/R_version_4.4.0_2024-04-24/significant_differences.csv" 
 [6] "/scratch/th798/data.table-revdeps/2024-04-30/packages/expss/R_version_4.4.0_2024-04-24/significant_differences.csv"         
 [7] "/scratch/th798/data.table-revdeps/2024-04-30/packages/ggPMX/R_version_4.4.0_2024-04-24/significant_differences.csv"         
 [8] "/scratch/th798/data.table-revdeps/2024-04-30/packages/maditr/R_version_4.4.0_2024-04-24/significant_differences.csv"        
 [9] "/scratch/th798/data.table-revdeps/2024-04-30/packages/mschart/R_version_4.4.0_2024-04-24/significant_differences.csv"       
[10] "/scratch/th798/data.table-revdeps/2024-04-30/packages/msmtools/R_version_4.4.0_2024-04-24/significant_differences.csv"      
[11] "/scratch/th798/data.table-revdeps/2024-04-30/packages/pointdensityP/R_version_4.4.0_2024-04-24/significant_differences.csv" 
[12] "/scratch/th798/data.table-revdeps/2024-04-30/packages/RNewsflow/R_version_4.4.0_2024-04-24/significant_differences.csv"     
[13] "/scratch/th798/data.table-revdeps/2024-04-30/packages/tidyfast/R_version_4.4.0_2024-04-24/significant_differences.csv"      
[14] "/scratch/th798/data.table-revdeps/2024-04-30/packages/TrialEmulation/R_version_4.4.0_2024-04-24/significant_differences.csv"
[15] "/scratch/th798/data.table-revdeps/2024-04-30/packages/vardpoor/R_version_4.4.0_2024-04-24/significant_differences.csv"      
[16] "/scratch/th798/data.table-revdeps/2024-04-30/packages/VoxR/R_version_4.4.0_2024-04-24/significant_differences.csv"          
[17] "/scratch/th798/data.table-revdeps/2024-04-30/packages/zeitgebr/R_version_4.4.0_2024-04-24/significant_differences.csv"      
>

so there must be an issue with the check_one.R script not generating that.

tdhock commented 6 months ago 
> (sig.diff.dt <- myDiff(Rvers))
Error in loadNamespace(x) : there is no package called 'nc'
Calls: myDiff ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted

solution was to install nc