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How to include synonyms for an identification in DwC? #166

Open seltmann opened 3 years ago

seltmann commented 3 years ago

I would like to include information about the synonymy of taxon names in a darwin core file that I am sharing. The file is to be included as specimens examined in a new species revision. What is the best way to include information about synonyms of the name?

I was considering simply put the information in http://rs.tdwg.org/dwc/terms/identificationRemarks or is there a better way?

Thanks!

tucotuco commented 3 years ago

Hi Katja,

Is it going to be a dataset based on a Taxon Core or on an Occurrence Core?

Cheers,

John

On Wed, Dec 16, 2020 at 1:25 PM Katja Seltmann notifications@github.com wrote:

I would like to include information about the synonymy of taxon names in a darwin core file that I am sharing. The file is to be included as specimens examined in a new species revision. What is the best way to include information about synonyms of the name?

I was considering simply put the information in http://rs.tdwg.org/dwc/terms/identificationRemarks or is there a better way?

Thanks!

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seltmann commented 3 years ago

The dataset is based on Occurrence Core to include locality information and other information about the collecting event.

Although it may make sense to include both since it includes description of new species. Thanks, Katja

seltmann commented 3 years ago

Hi @tucotuco I wanted to circle back about this. Our file contains these fields for 1145 specimens: occurrenceID,institutionCode,catalogNumber,sex,scientificName,typeStatus,recordedBy,kingdom,class,order,family,rank,scientificNameAuthorship,genus,specificEpithet,eventDate,verbatimEventDate,decimalLatitude,decimalLongitude,coordinatuncertantyinmeters,habitat,minimumElevationInMeters,maximumElevationInMeters,country,AssociatedTaxa,stateProvince,county,municipality,locationRemarks,samplingprotocol

And we would like to include information about the taxon synonyms for the 10 species in the study since one is a new species. Is there a preferred way to do this? Can this be done in the Occurrence Core?

Thanks! Katja

tucotuco commented 3 years ago

Hi @seltmann,

Sorry for the huge delay. Publishing through an Occurrence Core you could put the synonyms in previousIdentifications (https://dwc.tdwg.org/terms/#dwc:previousIdentifications), but even better in terms of richness would be to include an Identification History extension (https://tools.gbif.org/dwca-validator/extension.do?id=dwc:Identification). That would allow you to capture richer information about the names, if desired, but more importantly, one per row in the extension, and multiple rows per Occurrence, if necessary. Do either of those solution seem satisfactory?

seltmann commented 3 years ago

@tucotuco yes, this is perfect. Thank you!

tucotuco commented 3 years ago

Reopening because we haven't turned the answer into documentation yer.