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teamtomo / membrain-seg

membrane segmentation in 3D for cryo-ET
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Update cli.py example segment command #73

Closed GenevieveBuckley closed 2 days ago

GenevieveBuckley commented 4 days ago

There is no "predict" CLI command currently available, this should be "membrain segment" as described in segment_cli.py

https://github.com/teamtomo/membrain-seg/blob/0551c22184d02aa3108e24f4a57b11e459ffd512/src/membrain_seg/segmentation/cli/segment_cli.py#L115-L116

codecov-commenter commented 2 days ago

Codecov Report

All modified and coverable lines are covered by tests :white_check_mark:

Project coverage is 0.00%. Comparing base (bea5ae0) to head (c0695f0). Report is 8 commits behind head on main.

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Additional details and impacted files ```diff @@ Coverage Diff @@ ## main #73 +/- ## ====================================== Coverage 0.00% 0.00% ====================================== Files 40 46 +6 Lines 1411 1620 +209 ====================================== - Misses 1411 1620 +209 ```

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LorenzLamm commented 2 days ago

Many thanks for spotting this @GenevieveBuckley ! Merging this PR now :)