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teddygroves / bibat

A batteries-included template for Bayesian data analysis projects
https://bibat.readthedocs.io/
MIT License
18 stars 2 forks source link

Anaconda compatibility #32

Open teddygroves opened 1 year ago

teddygroves commented 1 year ago

See error from here:

$  make analysis
. .venv/bin/activate && (\
      python -m pip install --upgrade pip; \
      python -m pip install -r requirements.txt --quiet; \
      install_cmdstan ; \
    )
Requirement already satisfied: pip in /Users/davidnicholson/opt/anaconda3/lib/python3.7/site-packages (21.3.1)
Collecting pip
  Using cached pip-23.0.1-py3-none-any.whl (2.1 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.3.1
    Uninstalling pip-21.3.1:
      Successfully uninstalled pip-21.3.1
Successfully installed pip-23.0.1
ERROR: Cannot install -r requirements.txt (line 1) and scipy because these package versions have conflicting dependencies.
ERROR: ResolutionImpossible: for help visit https://pip.pypa.io/en/latest/topics/dependency-resolution/#dealing-with-dependency-conflicts
/bin/sh: install_cmdstan: command not found
teddygroves commented 5 months ago

See reviewer comment here: adding anaconda support would help non-anaconda users to easily see bibat's non-python dependencies.