`bamtocov` generated "ERROR: coverage went backwards from 0 to 0"

telatin / bamtocov

🏔 coverage extraction from BAM/CRAM files, supporting targets 📊

https://telatin.github.io/bamtocov/

MIT License

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`bamtocov` generated "ERROR: coverage went backwards from 0 to 0" #11

Open ChooseelBunsuwansakul opened 1 year ago

ChooseelBunsuwansakul commented 1 year ago

Describe the issue bamtocov file.bam generated "ERROR: coverage went backwards from 0 to 0"

System information (please complete the following information):

UBUNTU 20.04 app

Additional context I do not know what the error means. I generated bam file using minimap2 in Galaxy and I successfully visualized the bam file in IGV.

Thank you in advance.

telatin commented 4 weeks ago

Hi there, sorry for my late comment. was the file sorted?