tendermint / tm-db

Common database interface for various database backends for Tendermint Core and Cosmos SDK
Apache License 2.0
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memdb: Make iterators not channel based #188

Open ValarDragon opened 3 years ago

ValarDragon commented 3 years ago

Currently the memdb iterator is channel based: https://github.com/tendermint/tm-db/blob/master/memdb/iterator.go#L41-L86

This causes an extra thread lying around, and lots of lost dead time in dealing with channel wait times, in what should be a really fast hot loop. In the cacheKVStore usecase, the single core time for a Next() operation is 2-3x worse than before, and its actually using two threads so potentially 4-6x (perhaps double-counting, its a bit hard haha). The actual execution time looking at pprof has ~no time spent in the actual btree methods here.

This extra thread also makes debugging performance issues harder, and saturates other cores, which is pretty sub-ideal as we try to push more code to be multi-threaded!

The only thing that the channel structure buys, is letting two different processes read from the same iterator, with their reads being interleaved. This does not make sense as a usecase to me. You really shouldn't have multiple parallel processes reading from the same iterator in a blocking fashion as a general API, if this is needed it should be pushed to the iterator consumer. In general, parallelism should be pushing for each parallel process 'owning' the data its processing, and care being placed when it doesn't get to own the data for the duration of its execution. (E.g. rust's par_iter_mut has each process get one 'chunk' of the iterable space, not interleaved. This is beneficial for the data ownership / simplicity, reduced dead time, and cache efficiency)

ValarDragon commented 3 years ago

Its fairly hard to pin with certainty, but in some of our benchmarks that aren't doing much beyond creating many iterators, theres a ton of time going into mstart(), and mcall routines (both commonly used in golang parallel processing). It appears to be a 50x overhead over our entire exact computation.

Can't say with certainty its coming from these processes, but its the only component of the code I'm aware that uses goroutines. (And these are the only applicable sources of mcall and mstart I'm aware of)

Screenshot 2021-09-13 at 11 08 28 PM
ValarDragon commented 3 years ago

Looked into this some more, it definitely appears like our benchmark delay (50x) is coming from here, and this probably isnt from unclosed iterators. In the benchmark, there are 859926 created iterators, and the internal function registered closing at least 846118 of them, I highly doubt that the last 13k unclosed benchmarks is the delay, seeing as pprof shows the delay is in mstart.

Unfortunately the way google/btree's iterator is written essentially forces the iterator to be written the way it is. However, I think the performance demand here merits switching the library.

I recommend we switch to tidwall's btree library (which is imo a significant improvement over google's btree), and as a first pass use the path hint logic to make this iterator, fully single threaded, just via Get commands.

Then if/when we want more performance, its a very easy lift to just make the ascend and descend functions public https://github.com/tidwall/btree/blob/master/btree.go#L528, unlike in the google btree.

tac0turtle commented 3 years ago

If the change can be introduced in a non breaking way we could make this happen, otherwise a similar issue should be opened in the sdk as the Memdb was added there as well.

Love to see a db meant for testing purposes used in prod lol

ValarDragon commented 3 years ago

Oh yikes lol. I thought it was already used throughout the codebase, otherwise would've just re-imported a BTree :(

This can be added in a non-breaking way

tac0turtle commented 3 years ago

the memdb in the sdk is slated for another release. IF you want this change now, it would have to happen here

ValarDragon commented 3 years ago

agreed/understood, working on it here!

ValarDragon commented 3 years ago

No perms to re-open this. Can this remain open though, I am very much hoping to find someone with availability to work on this, its very much needed. This problem causes golang's race detector to catch lots of false positives =/

ValarDragon commented 3 years ago

I was investigating with traces, and basically ~all of our time is spent in deadtime with these chan.recv' and mutex unlocks aligning, and processes starting and stopping, between here and the IAVL iterator. Every get operation is requiring a sync between channels, which in these benchmarks is taking 70,000ns each when in a tight get loop.

This would also explain all the crazy delays in queries that involve iteration. I'm going to prioritize patches for these, maybe our nodes will finally be saved 😅

faddat commented 2 years ago

@ValarDragon I missed this somehow.

We'll begin work on it, but we expect this to be state breaking, right?

ValarDragon commented 2 years ago

Its not state breaking. This purely an in memory representation. I don't think this is where the big wins are though, as it only impacts cacheKV store.

faddat commented 2 years ago

The thinking is to start at the bottom, and work our way up-- especially since I'm learning as I go.

I figure that even if this dependency (tm-db) is slated to be deprecated, it has a year left in its lifespan

(time wasted on perf) x 100+ engineers = worth it I guess?

faddat commented 2 years ago

Ascend and descend are now public functions in tidwall/btree

ValarDragon commented 2 years ago

Yes, but the CacheKV store is not where any bottleneck is coming from right now.

catShaark commented 2 years ago

Ascend and descend are now public functions in tidwall/btree

but there's no AscendRange or similar function