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terraref / computing-pipeline

Pipeline to Extract Plant Phenotypes from Reference Data
BSD 3-Clause "New" or "Revised" License
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Remove existing genomic data #258

Closed nfahlgren closed 7 years ago

nfahlgren commented 7 years ago

The current genomic raw data in /hudson-alpha/raw_data/2016-03-21/ is somewhat derived (it was converted from bzip2 to gzip). I would like to upload the original bzip2 files as @phloz's pipeline now takes bzip2. Could we remove the above folder since I will replace it?

It's not blocking anything as is, so it's low priority.

dlebauer commented 7 years ago

Please go ahead and delete it if you have permissions. If not, let me know.

On Mon, Feb 6, 2017 at 5:35 PM Noah Fahlgren notifications@github.com wrote:

The current genomic raw data in /hudson-alpha/raw_data/2016-03-21/ is somewhat derived (it was converted from bzip2 to gzip). I would like to upload the original bzip2 files as @phloz https://github.com/phloz's pipeline now takes bzip2. Could we remove the above folder since I will replace it?

It's not blocking anything as is, so it's low priority.

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nfahlgren commented 7 years ago

@dlebauer ah I see, I can request deletes from Globus. Not sure if you or someone approved it, but it worked. Thanks!

dlebauer commented 7 years ago

sorry - I thought you were talking about cyverse ... I love to rm -rf everything!

On Mon, Feb 6, 2017 at 5:43 PM Noah Fahlgren notifications@github.com wrote:

Closed #258 https://github.com/terraref/computing-pipeline/issues/258.

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nfahlgren commented 7 years ago

Who doesn't :)

Noah

Director, Bioinformatics Core Facility Donald Danforth Plant Science Center 975 North Warson Road St. Louis, MO 63132 Email: nfahlgren@danforthcenter.org Phone: 314-587-1676

On Mon, Feb 6, 2017 at 5:47 PM, David LeBauer notifications@github.com wrote:

sorry - I thought you were talking about cyverse ... I love to rm -rf everything!

On Mon, Feb 6, 2017 at 5:43 PM Noah Fahlgren notifications@github.com wrote:

Closed #258 https://github.com/terraref/computing-pipeline/issues/258.

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