The following warnings are output when compiling the package:
17: replacing previous import 'Biobase::combine' by 'gridExtra::combine' when loading 'CBMRtools' 18: replacing previous import 'DESeq2::plotMA' by 'limma::plotMA' when loading 'CBMRtools' 19: replacing previous import 'limma::backgroundCorrect' by 'oligo::backgroundCorrect' when loading 'CBMRtools' 20: replacing previous import 'oligo::summarize' by 'plyr::summarize' when loading 'CBMRtools' 21: replacing previous import 'data.table::melt' by 'reshape2::melt' when loading 'CBMRtools' 22: replacing previous import 'data.table::dcast' by 'reshape2::dcast' when loading 'CBMRtools' 23: replacing previous import 'oligo::weights' by 'stats::weights' when loading 'CBMRtools' 24: replacing previous import 'oligo::coef' by 'stats::coef' when loading 'CBMRtools' 25: replacing previous import 'oligo::residuals' by 'stats::residuals' when loading 'CBMRtools'
I'm wondering whether this affects the correct functioning.
The following warnings are output when compiling the package:
17: replacing previous import 'Biobase::combine' by 'gridExtra::combine' when loading 'CBMRtools' 18: replacing previous import 'DESeq2::plotMA' by 'limma::plotMA' when loading 'CBMRtools' 19: replacing previous import 'limma::backgroundCorrect' by 'oligo::backgroundCorrect' when loading 'CBMRtools' 20: replacing previous import 'oligo::summarize' by 'plyr::summarize' when loading 'CBMRtools' 21: replacing previous import 'data.table::melt' by 'reshape2::melt' when loading 'CBMRtools' 22: replacing previous import 'data.table::dcast' by 'reshape2::dcast' when loading 'CBMRtools' 23: replacing previous import 'oligo::weights' by 'stats::weights' when loading 'CBMRtools' 24: replacing previous import 'oligo::coef' by 'stats::coef' when loading 'CBMRtools' 25: replacing previous import 'oligo::residuals' by 'stats::residuals' when loading 'CBMRtools'
I'm wondering whether this affects the correct functioning.