Questions about the alt column of the output file

tfwillems / HipSTR

Genotype and phase short tandem repeats using Illumina whole-genome sequencing data

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Questions about the alt column of the output file #92

Open wangxuleiii opened 1 year ago

wangxuleiii commented 1 year ago

Hello, when I finish running Hipstr, the output file content is:

May I ask why some rows in the Alt column have no content (the specific content is a '.') also exist in this table. Is this site also polymorphic? So why is there no content in Alt?