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tgbugs / hyputils

python utilities for hypothes.is
MIT License
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depopulate tags issues #4

Open tgbugs opened 5 years ago

tgbugs commented 5 years ago 
annos updated, memoizing new version with, 4111 members
[2019-02-13 13:39:13,007] - DEBUG - hyputils.hypothesis - Removing Hybrid.byId('-ktWpC71EemG-WPumDX8GQ') from 2 tag sets
Exception in thread Thread-1:
Traceback (most recent call last):
  File "/usr/lib64/python3.6/threading.py", line 916, in _bootstrap_inner
    self.run()
  File "/usr/lib64/python3.6/threading.py", line 864, in run
    self._target(*self._args, **self._kwargs)
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 220, in loop_target
    loop.run_until_complete(ws_loop(loop))
  File "/usr/lib64/python3.6/asyncio/base_events.py", line 468, in run_until_complete
    return future.result()
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 195, in ws_loop
    await process_or_exit(ws, handler, exit_reader)
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 140, in process_or_exit
    raise future.exception()
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 117, in process_messages
    handler.process(msg)
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 24, in process
    fh(message)
  File "/home/tom/git/hyputils/hyputils/handlers.py", line 22, in __call__
    self.handler(message)
  File "/home/tom/git/hyputils/hyputils/handlers.py", line 84, in handler
    out.append(helper(anno, self.annos))
  File "/home/tom/git/protc/protcur/protcur/analysis.py", line 347, in __new__
    return HypothesisHelper.__new__(cls, anno, annos)
  File "/home/tom/git/hyputils/hyputils/hypothesis.py", line 723, in __new__
    obj.depopulateTags()
  File "/home/tom/git/hyputils/hyputils/hypothesis.py", line 692, in depopulateTags
    tset.remove(self)  # this should never error if everything is working correctly
KeyError: <unprintable KeyError object>
tgbugs commented 5 years ago 
[2019-02-13 16:12:25,021] - DEBUG - hyputils.hypothesis - Removing Hybrid.byId('s_jaei74EemwRN835PK3yA') from 2 tag sets
Exception in thread Thread-1:
Traceback (most recent call last):
  File "/usr/lib64/python3.6/threading.py", line 916, in _bootstrap_inner
    self.run()
  File "/usr/lib64/python3.6/threading.py", line 864, in run
    self._target(*self._args, **self._kwargs)
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 220, in loop_target
    loop.run_until_complete(ws_loop(loop))
  File "/usr/lib64/python3.6/asyncio/base_events.py", line 468, in run_until_complete
    return future.result()
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 195, in ws_loop
    await process_or_exit(ws, handler, exit_reader)
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 140, in process_or_exit
    raise future.exception()
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 117, in process_messages
    handler.process(msg)
  File "/home/tom/git/hyputils/hyputils/subscribe.py", line 24, in process
    fh(message)
  File "/home/tom/git/hyputils/hyputils/handlers.py", line 22, in __call__
    self.handler(message)
  File "/home/tom/git/hyputils/hyputils/handlers.py", line 84, in handler
    out.append(helper(anno, self.annos))
  File "/home/tom/git/protc/protcur/protcur/analysis.py", line 347, in __new__
    return HypothesisHelper.__new__(cls, anno, annos)
  File "/home/tom/git/hyputils/hyputils/hypothesis.py", line 723, in __new__
    obj.depopulateTags()
  File "/home/tom/git/hyputils/hyputils/hypothesis.py", line 692, in depopulateTags
    tset.remove(self)  # this should never error if everything is working correctly
KeyError: <unprintable KeyError object>

[2019-02-13 16:12:43,837] ERROR in app: Exception on /curation/ [GET]
Traceback (most recent call last):
  File "/usr/lib64/python3.6/site-packages/flask/app.py", line 2292, in wsgi_app
    response = self.full_dispatch_request()
  File "/usr/lib64/python3.6/site-packages/flask/app.py", line 1808, in full_dispatch_request
    self.try_trigger_before_first_request_functions()
  File "/usr/lib64/python3.6/site-packages/flask/app.py", line 1855, in try_trigger_before_first_request_functions
    func()
  File "./server.py", line 554, in sparc_runonce
    hls = set(get_hypothesis_local(uri) for uri in SparcMI.uris)
  File "/home/tom/git/hyputils/hyputils/hypothesis.py", line 621, in uris
    return set(uri for uri, tags in self.uri_tags.items()
  File "/home/tom/git/hyputils/hyputils/hypothesis.py", line 611, in uri_tags
    uri_tags[obj.uri].update(obj._tags)
  File "/home/tom/git/hyputils/hyputils/hypothesis.py", line 810, in uri
    def uri(self): return self._anno.uri
  File "/home/tom/git/hyputils/hyputils/hypothesis.py", line 782, in _anno
    def _anno(self): return self._annos[self.id]  # this way updateds to annos will propagate
KeyError: 's_jaei74EemwRN835PK3yA'
127.0.0.1 - - [13/Feb/2019 16:12:43] "GET /curation/ HTTP/1.0" 500 -