Closed memartone closed 2 years ago
Huang uses Sst that is a sequence feature which is why I suspect that it is not coming back with the query.
I looked into how genes were modelled in other ontologies with an eye toward unifying their modelling with epigenetic modifications. Sequence feature is what others use and from a discussion with Marga Behrens it seemed that that was also how the epi folks are thinking about what they are measuring.
But it is not used consistently. So it is causing our query to fail. So pick one or the other.
On May 16, 2019, at 9:21 AM, Tom Gillespie notifications@github.com wrote:
I looked into how genes were modelled in other ontologies with an eye toward unifying their modelling with epigenetic modifications. Sequence feature is what others use and from a discussion with Marga Behrens it seemed that that was also how the epi folks are thinking about what they are measuring.
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Query issue resolved via phenotype indicators.
http://purl.obolibrary.org/obo/SO_0000110