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tgen / jetstream_resources

Collection of scripts and README files tracking the source and generation of reference genomes and annotation files
MIT License
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Missing target file for "bcftools stats" command in file "build_gnomAD_r2.1.1.sh" #2

Closed ChristopheLegendre closed 5 years ago

ChristopheLegendre commented 5 years ago

Hi Dr. J. Keats, The script has a bug in line 53 of the file build_gnomAD_r2.1.1.sh. The target file is missing. please add the following at the end of line 53: > gnomad.exomes.r2.1.1.sites.liftover_grch38.bcf.stats

Same issue line 93. please add at the end of the line: > gnomad.genomes.r2.1.1.sites.liftover_grch38.bcf.stats

Thanks for taking into account my suggestions. Chris.

ChristopheLegendre commented 5 years ago

The fix is Done. information added to the scripts;