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tgen / lumosVar2

Calls somatic SNVs, indels, and allelic copy number jointly across multiple samples from the same patient. These can be standard tumor/normal pair, longitudinal samples, primary/met, etc. Can also be used for tumor only calling, ideally with a high tumor content and a low tumor content sample.
MIT License
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lumosvarmain #9

Closed pllittle closed 3 years ago

pllittle commented 3 years ago

Hi,

I'm interested in running lumosvar2 and I think I've successfully run the normal metrics step. For the main step, where is ./lumosVarMain ? This file isn't in the bin directory.

Thanks.

pllittle commented 3 years ago

Hi,

I decided to use the executable in the v1.1 release. Thanks.