tgen / tempe

A container focused and streamlined iteration of the Phoenix pipeline
GNU General Public License v3.0
2 stars 1 forks source link

Samtools merge CPU #43

Closed PedalheadPHX closed 1 year ago

PedalheadPHX commented 1 year ago

https://github.com/tgen/tempe/blob/7575cec83822ed77b0d0747e0ff3cf91dfd7a956/modules/dna_alignment/bwa_mem2_samtools.j2#L114

in phoenix we only use 8 not 16 with the same 8G ram

bryce-turner commented 1 year ago

Fixed in https://github.com/tgen/tempe/releases/tag/v1.2.0