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tgvaughan / MASTER

A versatile simulation engine for stochastic population dynamics models.
http://tgvaughan.github.io/MASTER
GNU General Public License v3.0
22 stars 8 forks source link

Users reporting problems with recent versions of OS X #28

Closed tgvaughan closed 10 years ago

tgvaughan commented 10 years ago

Symptom is that BEAST dialog opens, accepts input file, but then does nothing (i.e. no output is generated). Has to do with deployment, as same users do not experience problems when running MASTER from within IDE.

tgvaughan commented 10 years ago

It seems that avoiding onejar will solve this issue.

tgvaughan commented 10 years ago

New deployment (for 1.4.1) seems to solve this.

aersoares81 commented 10 years ago

It's still happening for me… Maybe I'm expecting a screen telling me it's working? When I select one of the example .xml files it instantly closes the program, but there's an output file created on my folder. (OS X 10.9, java version "1.7.0_45").

tgvaughan commented 10 years ago

If there's an output file being generated, you're in the clear and the program is functioning correctly. (Not very flashy, I know!) That file (depending on which example you ran) should be a JSON, Newick or Nexus file containing the results of the simulation. The problem this issue referred to involved no output being generated.

aersoares81 commented 10 years ago

Hi,

Ok, thanks! I was a bit confused by the lack of visual confirmation it was running (feature suggestion?).

Thanks for your work on this project, looking forward to use it very soon. :)

On Mon, Nov 25, 2013 at 12:26 PM, Tim Vaughan notifications@github.comwrote:

Hi there,

If there's an output file being generated, you're in the clear and the program is functioning correctly. (Not very flashy, I know!) That file (depending on which example you ran) should be a JSON, Newick or Nexus file containing the results of the simulation.The problem this issue referred to involved no output being generated.

On 26 November 2013 08:01, aersoares81 notifications@github.com wrote:

It's still happening for me… Maybe I'm expecting a screen telling me it's working? When I select one of the example .xml files it instantly closes the program, but there's an output file created on my folder. (OS X 10.9, java version "1.7.0_45").

— Reply to this email directly or view it on GitHub< https://github.com/CompEvol/MASTER/issues/28#issuecomment-29230965> .

— Reply to this email directly or view it on GitHubhttps://github.com/CompEvol/MASTER/issues/28#issuecomment-29238674 .