The examples for 'pick_by_tree` are broken in the documentation https://thackl.github.io/gggenomes/reference/pick.html. They do work in local builds. There seems to be an issue with reading either the tree file or with converting it to a ggtree object. @iimog, maybe you can take a look...
The examples for 'pick_by_tree` are broken in the documentation https://thackl.github.io/gggenomes/reference/pick.html. They do work in local builds. There seems to be an issue with reading either the tree file or with converting it to a ggtree object. @iimog, maybe you can take a look...