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thartbm / PyVMEC

A Python-based GUI to create and run visuo-motor experiments.
GNU General Public License v3.0
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Pre-processing error #94

Closed thartbm closed 5 years ago

thartbm commented 5 years ago

Using the data from the toy task to test pre-processing, I get an error:

Traceback (most recent call last):
  File "/home/marius/Science/PyVMEC/PyVMEC/GUI.py", line 1908, in preprocess_button_click
    preprocessed_data = pp.process_participants(self.participant_list_dynamic, self.task_list_dynamic, self.Parent.experiment_holder, self.cfg)
  File "/home/marius/Science/PyVMEC/PyVMEC/Preprocess.py", line 172, in process_participants
    if int(row[2]) >= 0:
ValueError: invalid literal for int() with base 10: ''

I have copied the JSON into the directory of each participant. It was never changed, so that should have worked. However, something seems to be empty now... I'm not sure if that is data being read in, or the list of participants.

Here is the dataset I'm working with: preprocessing.zip

juliusjgm12 commented 5 years ago

I see what happened.

The issue is within error-clamp trials on old data.

Old raw data had no values for rotation angle. This is only an issue in old data but it causes an issue since pre-processing checks that column for "integer" values.

I'll make a fix to set empty values to zero.

juliusjgm12 commented 5 years ago

Should work now for that data set.