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theMILOlab / SPATA2

A Toolbox for Spatial Gene Expression Analysis
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plotSurface(object_t269, color_by = "Seurat", pt_clrp = "jama") #107

Closed healthgreat closed 2 months ago

healthgreat commented 3 months ago

plotSurface(object_t269, color_by = "Seurat", pt_clrp = "jama") 22:03:20 Joining 1 feature. 22:03:22 Done. Error in grid.Call.graphics(C_points, x$x, x$y, x$pch, x$size) : cannot allocate memory block of size 134217728 Tb In addition: Warning message: In color_vector(clrp = clrp, names = names, clrp.adjust = clrp.adjust) : Chosen colorpalette 'jama' provides 10 colors. Need 14 colors. Returning 'default' colorpalette.

simonmfr commented 3 months ago

Hi, this is a memory error, please either increase RAM or use a subset of the object.