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theMILOlab / SPATA2

A Toolbox for Spatial Transcriptomics Analysis
https://themilolab.github.io/SPATA2/
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Error in purrr::map(.x = seq_along(id), .f = function(i) { : Caused by error in `map_df()`: ! could not find function "map_df" #112

Closed cubense closed 1 month ago

cubense commented 5 months ago

Dear SPATA2 team, I wanna do the "Image Annotation Screening" in my project. when I do the 5.1 Visualization step, 

#using ten circle bins to visualize the concept
 ias_layer_bins <- ggpLayerEncirclingIAS(object = object,distance = "1mm", n_bins_circle = 6, id = "tip_center",line_size = 1 )

and I got this error

Specified distance = 1mm and n_bins_circle = 7. Calculated binwidth = 0.1429mm. Error in purrr::map(): i In index: 1. Caused by error in map_df(): ! could not find function "map_df" Backtrace:

  1. SPATA2::ggpLayerEncirclingIAS(...)
  2. purrr::map(...)
  3. purrr:::map_("list", .x, .f, ..., .progress = .progress)
  4. SPATA2 (local) .f(.x[[i]], ...)

I have try to reinstall purrr, but I got the same error. what should I do.

simonmfr commented 1 month ago

HI @cubense, sorry for the delay. We have now released a major update to SPATA2 v3, please re-install and re-try following the new Spatial Annotation Screening tutorial. If any issue persists, feel free to re-open.