theMILOlab / SPATA2

A Toolbox for Spatial Gene Expression Analysis
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"Invalid pointer" error when installing v2.0.0 or above #80

Closed Tang-YH closed 1 year ago

Tang-YH commented 1 year ago

Hi! I encountered this error while installing SPATA2 version v2.0.0 or above:

* installing *source* package ‘SPATA2’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
sh: line 1: 122803 Aborted                 R_TESTS= '/software/r/4.0.0/lib64/R/bin/R' --no-save --no-restore --no-echo 2>&1 < '/tmp/RtmpeIlBjz/file1dc6b57e975d4'
*** Error in `/software/r/4.0.0/lib64/R/bin/exec/R': free(): invalid pointer: 0x00000000058b40e8 ***
======= Backtrace: =========
/lib64/libc.so.6(+0x81329)[0x7fa8b7e08329]
/internal/tangy/R/library/4.0/units/libs/units.so(_ZN4Rcpp9exception18record_stack_traceEv+0x1f2)[0x7fa8ad18e5c2]
/internal/tangy/R/library/4.0/units/libs/units.so(_ZN4Rcpp9exceptionC2EPKcb+0x89)[0x7fa8ad18eab9]
/internal/tangy/R/library/4.0/units/libs/units.so(_ZN4Rcpp4stopIJPcEEEvPKcDpOT_+0x3f)[0x7fa8ad19613f]
/internal/tangy/R/library/4.0/units/libs/units.so(_ZN4Rcpp17finalizer_wrapperI7ut_unitXadL_Z7ut_freeEEEEvP7SEXPREC+0x0)[0x7fa8ad195a00]
/internal/tangy/R/library/4.0/units/libs/units.so(_units_R_ut_parse+0x6b)[0x7fa8ad18b9fb]

Could you help me look into it? I did not meet the same error when installing v1.0.0.

Best regards, Yiheng