GATK problem. - Githubissues

theboocock / ancient_dna_pipeline

MIT License

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Open theboocock opened 9 years ago

theboocock commented 9 years ago

MergeGVCFs and ploidy = 1 seems to make the GATK hang.

theboocock commented 9 years ago

Problem is human heteroplasmies, need to disable these regions.