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thechiselgroup / biomixer

BioMixer
http://bio-mixer.appspot.com/
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Ontology Property Relations Slower, Add Processing Indicator? #448

Closed everbeek closed 9 years ago

everbeek commented 9 years ago

When loading graphs, if ontology defined property relations exist, they tend to come in slower than other concepts. See 'artery' in the link below. It is possible that the extreme slowness that one can exhibit is due to too many relations from 'artery' outward.

http://127.0.0.1:8888/conceptPathToRoot.html?gwt.codesvr=127.0.0.1:9997&initial_vis=term_neighborhood&ontology_acronym=UBERON&full_concept_id=http%3A%2F%2Fpurl.obolibrary.org%2Fobo%2FUBERON_0006591&restURLPrefix=data.bioontology.org

everbeek commented 9 years ago

It is no longer slow. I changed the logic around relations and expansions for issue #517, and the artery node loads quick enough now, with a short delay past the inheritance relations.