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thegenemyers / DALIGNER

Find all significant local alignments between reads
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align SMRT cells against a reference #61

Closed mictadlo closed 7 years ago

mictadlo commented 7 years ago

Hi, How Is it possible to align RSII and Sequel SMRT cells against a reference genome and received mapped and unmapped reads?

Thank you in advance.

Michal

thegenemyers commented 7 years ago

Use the DAMAPPER module. The link to the blog post is here

https://dazzlerblog.wordpress.com/2016/07/31/damapper-mapping-your-reads/

On 5/21/17, 11:10 PM, Michał T. Lorenc wrote:

Hi, How Is it possible to align RSII and Sequel SMRT cells against a reference genome and received mapped and unmapped reads?

Thank you in advance.

Michal

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