Closed mictadlo closed 6 years ago
Hmm, I ran exactly your sequence on a small E.Coli data base and did not encounter a problem. Your more recent issue e-mail about the daligner itself suggests you got passed this issue, please advise? (And if you did figure out what the problem is could you let me know.) -- Gene
On 12/26/17, 10:17 PM, Michał T. Lorenc wrote:
Hi,
I got many |daligner: Track 'dust' annotation file is junk| with the following commands
DBsplit -x500 -s200 DB DBdust DB HPC.daligner DB -T8 -mdust -H6973 bash -v Did I miss anything?
Thank you in advance.
Michal
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I think I have forgotten to do Catrack -v DB dust
Hi,
I got many
daligner: Track 'dust' annotation file is junk
with the following commandsI wrote the following script to submit each command from
test.01.OVL
parallel.The script gets executed as following way
sh HPC.daligner_pbs.sh test.01.OVL
Did I miss anything?
Thank you in advance.
Michal