Closed a-ludi closed 4 years ago
It would be very useful to have an option that tells LAcheck to try to fix errors it finds - I would suggest -f. The fixable errors are:
-f
The third case should be maybe only fixed if the user really wants it fixed, e.g. by passing two times the -f option or maybe a -F option.
-F
The second case is of special importance because both daligner and damapper produce duplicate alignments from time to time and it's very easy to fix.
daligner
damapper
It would be very useful to have an option that tells LAcheck to try to fix errors it finds - I would suggest
-f
. The fixable errors are:The third case should be maybe only fixed if the user really wants it fixed, e.g. by passing two times the
-f
option or maybe a-F
option.The second case is of special importance because both
daligner
anddamapper
produce duplicate alignments from time to time and it's very easy to fix.