theiagen / public_health_bacterial_genomics

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output kraken2 database used for analysis #215

Open kapsakcj opened 1 year ago

kapsakcj commented 1 year ago

currently, the Kraken2 workflows do not report which database was used at the time of analysis - I often have to backtrack to the Terra workflow logs to see which DB was used. I would prefer to have a String output that states the name, or perhaps the original filename of the k2 DB