User requested a tNGS workflow that runs (1) clockwork -> (2) TBProfiler -> (3) tbp-parser with potentially read trimming.
:books: Context
tNGS currently cannot be analyzed with the TheiaProk workflows. Since it is targeted data, creation of an assembly would fail as would other modules that are run automatically.
:chart_with_upwards_trend: Desired Behavior
A workflow designed to take raw tNGS M. tb data and return the outputs of tbp-parser.
:cool:
:pushpin: Explain the Request
User requested a tNGS workflow that runs (1) clockwork -> (2) TBProfiler -> (3) tbp-parser with potentially read trimming.
:books: Context
tNGS currently cannot be analyzed with the TheiaProk workflows. Since it is targeted data, creation of an assembly would fail as would other modules that are run automatically.
:chart_with_upwards_trend: Desired Behavior
A workflow designed to take raw tNGS M. tb data and return the outputs of tbp-parser.
:information_source: Additional Information
Due by end of January