[Gene Coverage] Modularize the gene coverage - Githubissues

theiagen / public_health_bioinformatics

Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health concern.

GNU General Public License v3.0

34 stars 16 forks source link

[Gene Coverage] Modularize the gene coverage #325

Closed sage-wright closed 4 months ago

sage-wright commented 6 months ago

:cool:

:pushpin: Explain the Request

See also issue #312

Modularize the sc2_gene_coverage task by altering it to iterate through bed files that contain regions of interest and organizing those bed files in the organism_parameter.wdl subworkflow

:books: Context

:chart_with_upwards_trend: Desired Behavior

:information_source: Additional Information