[TheiaCoV_Illumina_PE] assembly_mean_coverage always being reported as empty for flu samples

theiagen / public_health_bioinformatics

Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health concern.

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Closed cimendes closed 4 months ago

cimendes commented 4 months ago

:bug:

The values in this validation show the result of assembly_mean_coverage always as HA: , NA: for all flu samples. https://app.terra.bio/#workspaces/theiagen-validations/PHB_Validation_PR_310 -> theiacov_illumina_pe data table