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theiagen / public_health_bioinformatics

Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of pathogens of public health concern.
GNU General Public License v3.0
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[theiacov] update default pangolin docker image to pdata 1.27 & other default docker images when applicable #454

Closed kapsakcj closed 1 week ago

kapsakcj commented 2 months ago

:cool:

:pushpin: Explain the Request

update default to us-docker.pkg.dev/general-theiagen/staphb/pangolin:4.3.1-pdata-1.27

here: https://github.com/theiagen/public_health_bioinformatics/blob/ecd98a99160d016e10bc6d5222c8348f60b08262/workflows/utilities/wf_organism_parameters.wdl#L46

:books: Context

:chart_with_upwards_trend: Desired Behavior

:information_source: Additional Information

kapsakcj commented 2 months ago

Should be completed before next release. Not urgent to update now

sage-wright commented 1 month ago

Also update other default docker images and dataset tags, etc. before next release if applicable