Titan single-end workflows have cleaned read output named as read1_clean

theiagen / public_health_viral_genomics

Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of viral pathogens of concern, especially SARS-CoV-2

https://public-health-viral-genomics-theiagen.readthedocs.io/

GNU Affero General Public License v3.0

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Titan single-end workflows have cleaned read output named as read1_clean #13

Closed kevinlibuit closed 3 years ago

kevinlibuit commented 3 years ago

rename to reads_clean to avoid confusion and remain consistent with input variable name (reads)

kevinlibuit commented 3 years ago

Addressed: https://github.com/theiagen/public_health_viral_genomics/commit/1a3d1b75db8b80c8c810e17d065bc6c628dc2372