theiagen / public_health_viral_genomics

Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of viral pathogens of concern, especially SARS-CoV-2
https://public-health-viral-genomics-theiagen.readthedocs.io/
GNU Affero General Public License v3.0
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harmonize titan gc outputs #20

Closed kevinlibuit closed 3 years ago

kevinlibuit commented 3 years ago

fastqc versions for Titan ONT & ClearLabs

rpetit3 commented 3 years ago

illumina workflows (se, pe) say sam_version clearlabs and ont are samtools_version

rpetit3 commented 3 years ago

I think we might be good here.

kevinlibuit commented 3 years ago

Addressed https://github.com/theiagen/public_health_viral_genomics/commit/1a3d1b75db8b80c8c810e17d065bc6c628dc2372