theiagen / public_health_viral_genomics

Bioinformatics workflows for genomic characterization, submission preparation, and genomic epidemiology of viral pathogens of concern, especially SARS-CoV-2
https://public-health-viral-genomics-theiagen.readthedocs.io/
GNU Affero General Public License v3.0
39 stars 17 forks source link

Need for VCF output from ivar #39

Closed kevinlibuit closed 3 years ago

rpetit3 commented 3 years ago

Related to https://github.com/StaPH-B/docker-builds/pull/245

rpetit3 commented 3 years ago

PR created https://github.com/theiagen/public_health_viral_genomics/pull/55