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theislab
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anndata2ri
Convert between AnnData and SingleCellExperiment
https://icb-anndata2ri.readthedocs-hosted.com/
GNU General Public License v3.0
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Unable to load Seurat library after activating anndata2ri
#138
jchen80
closed
10 months ago
2
[pre-commit.ci] pre-commit autoupdate
#137
pre-commit-ci[bot]
closed
11 months ago
0
Missing layers after conversion from SCE
#136
shaln
closed
11 months ago
1
[pre-commit.ci] pre-commit autoupdate
#135
pre-commit-ci[bot]
closed
11 months ago
0
[pre-commit.ci] pre-commit autoupdate
#134
pre-commit-ci[bot]
closed
11 months ago
0
[pre-commit.ci] pre-commit autoupdate
#133
pre-commit-ci[bot]
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#132
pre-commit-ci[bot]
closed
1 year ago
0
Create dependabot.yml
#131
flying-sheep
closed
1 year ago
0
Fix rpy2 dependency
#130
flying-sheep
closed
1 year ago
0
anndata2ri activation error
#129
SaiH99
closed
1 year ago
4
Fix docs
#128
flying-sheep
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#127
pre-commit-ci[bot]
closed
1 year ago
0
Fix int csr_matrix
#126
flying-sheep
closed
1 week ago
0
enable pytest -Werror
#125
flying-sheep
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#124
pre-commit-ci[bot]
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#123
pre-commit-ci[bot]
closed
1 year ago
0
Unknown dtype dtype('int64') cannot be converted to ?gRMatrix.
#122
lazappi
closed
1 week ago
5
Fix formatting
#121
flying-sheep
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#120
pre-commit-ci[bot]
closed
1 year ago
1
Fix docs
#119
flying-sheep
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#118
pre-commit-ci[bot]
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#117
pre-commit-ci[bot]
closed
1 year ago
0
Don’t accept warnings in tests
#116
flying-sheep
closed
1 year ago
0
Prettier
#115
flying-sheep
closed
1 year ago
0
Support converting bool matrices
#114
flying-sheep
closed
1 year ago
0
Fully support and test bool matrices
#113
flying-sheep
closed
1 year ago
0
Ruff
#112
flying-sheep
closed
1 year ago
0
Figure out stacklevel for errors and warnings
#111
flying-sheep
opened
1 year ago
0
Test remaining R matrix types
#110
flying-sheep
opened
1 year ago
0
Get rid of activate()
#109
flying-sheep
opened
1 year ago
0
Switch to Ruff
#108
flying-sheep
closed
1 year ago
0
master -> main
#107
flying-sheep
closed
1 year ago
0
Modernize CI
#106
flying-sheep
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#105
pre-commit-ci[bot]
closed
1 year ago
0
ValueError: Not an rpy2 R object and unable to map it to one: AnnData object with
#104
nroak
closed
1 year ago
2
ValueError: Unknown dtype dtype('uint16') cannot be converted to ?gRMatrix.
#103
nroak
closed
1 year ago
2
[pre-commit.ci] pre-commit autoupdate
#102
pre-commit-ci[bot]
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#101
pre-commit-ci[bot]
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#100
pre-commit-ci[bot]
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#99
pre-commit-ci[bot]
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#98
pre-commit-ci[bot]
closed
1 year ago
0
[pre-commit.ci] pre-commit autoupdate
#97
pre-commit-ci[bot]
closed
1 year ago
0
Support DelayedMatrix assays
#96
multimeric
opened
1 year ago
0
Fix DataFrames in obsm
#95
flying-sheep
closed
1 year ago
0
When I used the anndata2ri and rpy2, the error happened.
#94
melancholy12
closed
1 year ago
1
scvelo cannot read the loom files
#93
mayurdoke6
closed
1 year ago
1
[pre-commit.ci] pre-commit autoupdate
#92
pre-commit-ci[bot]
closed
1 year ago
0
Replace deprecated `rpy2.robjects.conversion.converter`
#91
scottgigante-immunai
closed
1 year ago
0
Exactly how to use LocalConverter to convert from AnnData to SCE within a normal Python script
#90
EdwardAgboraw
closed
1 year ago
2
[pre-commit.ci] pre-commit autoupdate
#89
pre-commit-ci[bot]
closed
2 years ago
0
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