Calculate correlation betw. good reconstruction score & low disentanglement score

theislab / chemCPA

Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.

https://arxiv.org/abs/2204.13545

MIT License

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Calculate correlation betw. good reconstruction score & low disentanglement score #83

Closed siboehm closed 2 years ago

siboehm commented 2 years ago

Should go into the analyze_lincs_all_embeddings_hparam.ipynb. We use this to show that the counterfactual prediction is working correctly and that the information coming from the embeddings is actually useful.

MxMstrmn commented 2 years ago

The regression is computed without the weave models (they all appear to perform just worse)

siboehm commented 2 years ago

Great, looks the way it should look. Closing