theislab / cpa

The Compositional Perturbation Autoencoder (CPA) is a deep generative framework to learn effects of perturbations at the single-cell level. CPA performs OOD predictions of unseen combinations of drugs, learns interpretable embeddings, estimates dose-response curves, and provides uncertainty estimates.
BSD 3-Clause "New" or "Revised" License
76 stars 17 forks source link

The versions for scvi-tools for CPA #6

Closed bitcometz closed 1 year ago

bitcometz commented 2 years ago

Hello, I have installed the CPA software but I found the results very different from the published. I think it is due to that I have installed the latest version of scvi-tools. Could you please provide the specific version of scvi-tools used in this software ?

Best

Naghipourfar commented 1 year ago

Hi @bitcometz,

Could you please install the latest version again? Just released v0.3.0 which is compatible with latest version of scvi-tools.

Thanks, Mohsen

bitcometz commented 1 year ago

Thanks !!!