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theislab / diffxpy

Differential expression analysis for single-cell RNA-seq data.
https://diffxpy.rtfd.io
BSD 3-Clause "New" or "Revised" License
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ValueError: assignment destination is read-only in de.test.wald with small examples #211

Open MatthiasLienhard opened 2 years ago

MatthiasLienhard commented 2 years ago

When running the example for differential testing from diffxpy_tutorials/test/introduction_differential_testing.ipynb as it is, with 100 genes, de.test.wald raises a ValueError: assignment destination is read-only. When increasing the number of genes to 200, this error goes away.

MatthiasLienhard commented 2 years ago

Apparently, the number of genes has to be above 128 for the example to run.

I am using