theislab / mubind-benchmark

snakemake and notebook results for mubind package (weekly results )
MIT License
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Merge branch development to main #2

Closed ege-erdogan closed 1 year ago

ege-erdogan commented 1 year ago

For issue #1

Config file now accepts n_epochs, batch_sizes, learning_rates as lists; trains separate model for each combination of three values.

After training, models are saved separately, with the # epochs, batch size, and learning rate values added to the model names.

All metrics are saved to the same file as before, with the # epochs, batch size, learning rate values added as columns.