theislab / mubind-benchmark

snakemake and notebook results for mubind package (weekly results )
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Run with variable epochs e.g. [10, 100, 200] and save output as a single row per n_epochs in metrics.tsv #8

Open ilibarra opened 1 year ago

ilibarra commented 1 year ago

Currently, the output of the pipeline is saved per each epoch. This is useful, yet this loss history is saved in the models loss_history variable. It is much more relevant to save the best r2 per run, after the run has finished.