theislab / nicheformer

Repository for Nicheformer: a foundation model for single-cell and spatial omics
BSD 3-Clause "New" or "Revised" License
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The niche_label of MERFISH mouse brain #15

Open Lzzzzx opened 2 months ago

Lzzzzx commented 2 months ago

Thank you for your work. Now I'm trying to use the MERFISH Mouse Brain Dataset, but I don't know how to get the niche_label in it. Beacuse it doesn't seem to match anything in Yao et al.'s work. Could you suggest some ways to approach this? I'm deeply thankful for your assistance.