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theislab
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pertpy
Perturbation Analysis in the scverse ecosystem.
https://pertpy.readthedocs.io/en/latest/
MIT License
83
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16
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scCODA convergence issue for continous covairables
#597
Marwansha
opened
18 hours ago
0
Fix from_scanpy
#596
Zethson
closed
1 day ago
1
Can't import pertpy owing to NameError!!!
#595
kakkboy
closed
1 day ago
6
[pre-commit.ci] pre-commit autoupdate
#594
pre-commit-ci[bot]
closed
2 days ago
0
Unable to import pertpy due to SymPy error
#593
dmj6288
closed
1 day ago
4
scgen test broken
#592
Zethson
opened
1 week ago
1
[pre-commit.ci] pre-commit autoupdate
#591
pre-commit-ci[bot]
closed
1 week ago
0
Add file lock during downloading
#590
wxicu
closed
1 week ago
1
Weird behavior of Sccoda
#589
ngvananh2508
closed
1 day ago
18
Use __all__
#588
Zethson
closed
1 week ago
1
Expression prediction tutorial
#587
Zethson
opened
2 weeks ago
1
Use lamin logger
#586
Zethson
closed
2 weeks ago
1
[pre-commit.ci] pre-commit autoupdate
#585
pre-commit-ci[bot]
closed
2 weeks ago
1
Can not import pertpy
#584
SimonE1220
closed
1 month ago
1
Use __all__ for public interfaces
#583
Zethson
closed
1 week ago
0
`annotate_compounds` for combinations of drugs
#582
MUCDK
opened
1 month ago
2
[pre-commit.ci] pre-commit autoupdate
#581
pre-commit-ci[bot]
closed
1 month ago
0
Augur sklearn warning
#580
namsaraeva
closed
1 month ago
3
Check and fix plotting functions
#579
namsaraeva
closed
1 month ago
0
[pre-commit.ci] pre-commit autoupdate
#578
pre-commit-ci[bot]
closed
1 month ago
1
SCGEN lack of examples
#577
namsaraeva
opened
1 month ago
0
Add sciplex-GxE dataloader
#576
namsaraeva
closed
1 month ago
1
Add dgidb and pharmgkb for drug annotation
#575
wxicu
closed
1 month ago
2
Harmonize plots
#574
namsaraeva
closed
1 month ago
4
Silence pandas groupby() warning when running Augur predict
#573
namsaraeva
closed
1 month ago
1
Update README.md
#572
namsaraeva
closed
1 month ago
1
[pre-commit.ci] pre-commit autoupdate
#571
pre-commit-ci[bot]
closed
1 month ago
0
uv for CI
#569
Zethson
closed
1 month ago
0
encounting issues when running DIALOGUE
#568
SNOL2
opened
1 month ago
0
Pre-release CI arviz: ImportError: cannot import name 'gaussian' from 'scipy.signal'
#567
Zethson
closed
1 month ago
1
MLPClassifierSpace on papalexi_2021 fails with TypeError: cannot pickle 'weakref.ReferenceType' object
#566
Lilly-May
opened
1 month ago
5
Compute method for MLPClassifierSpace
#565
Lilly-May
closed
1 month ago
3
Merge from main
#564
wxicu
closed
1 month ago
0
0.7.0 release
#563
Zethson
closed
1 month ago
0
Compute method for MLPClassifierSpace
#562
Lilly-May
closed
1 month ago
0
[pre-commit.ci] pre-commit autoupdate
#561
pre-commit-ci[bot]
closed
1 month ago
1
Logistic regression support for the Discriminator Classifier
#560
Lilly-May
closed
1 month ago
5
Allow saving of CODA plots
#559
namsaraeva
closed
1 month ago
2
[pre-commit.ci] pre-commit autoupdate
#558
pre-commit-ci[bot]
closed
2 months ago
1
Enable a way to save sccoda plots
#557
LinearParadox
closed
1 month ago
2
Add dataloader for sciplex-GxE
#556
Zethson
opened
2 months ago
0
Order plot functions last
#555
Zethson
closed
2 months ago
0
Sparse guide RNA plot
#554
Zethson
closed
2 months ago
0
Rename cmap to palette
#553
Zethson
closed
2 months ago
0
Added milo beeswarm example plot
#552
namsaraeva
closed
2 months ago
1
Small fixes to milo.plot_da_beeswarm
#551
emdann
closed
2 months ago
1
Fix jax config
#550
Zethson
closed
2 months ago
0
ImportError: cannot import name 'config' from 'jax.config'
#549
namsaraeva
closed
2 months ago
10
pre-release CI fails with AttributeError: module 'mpmath' has no attribute 'rational'
#548
Zethson
closed
1 month ago
1
fixed augur runtime
#547
zzheng18
closed
2 months ago
1
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